SymptomDigestive system

Chronic Diarrhea: Causes and What to Do

Chronic diarrhea means loose or watery stools, usually three or more times a day, lasting 4 weeks or longer. Unlike short-term diarrhea, it is rarely a simple infection. Common causes are irritable bowel syndrome, food intolerances, celiac disease, inflammatory bowel disease, microscopic colitis and medicines. Blood in the stool, weight loss, waking at night to pass stool, or onset after age 50 are red flags that need prompt investigation.

Also called: Persistent diarrhea, long-term diarrhea, recurrent loose stools

At a glance

Definition
Loose or watery stools lasting 4 weeks or more.
Common causes
IBS with diarrhea, lactose or other food intolerance, celiac disease, IBD, microscopic colitis, medicines and bile acid diarrhea.
Red flags
Blood in stool, weight loss, night-time diarrhea, anemia, fever, age over 50 at onset, family history of bowel cancer.
Key tests
Blood count, celiac antibodies, stool calprotectin, stool infection tests and colonoscopy when needed.
Treatment
Depends on the cause; diet changes, specific medicines and fluid replacement.

When to get help

Call 911 or go to the ER

  • Signs of severe dehydration: very little or no urine, dizziness or fainting, confusion, a racing heart
  • Large amounts of blood or black, tarry stools
  • Severe belly pain with a swollen, tender belly and fever

See a doctor within a day or two

  • Diarrhea with blood or mucus lasting more than a few days
  • Fever above 38.5 °C (101.3 °F) with ongoing diarrhea
  • Diarrhea after a recent course of antibiotics or hospital stay (possible C. difficile)
  • Weight loss of more than 5 percent of body weight, such as 8 lb (3.5 kg) for a 160 lb (73 kg) person, without trying

Book a routine appointment

  • Diarrhea most days for more than 4 weeks, even without other symptoms
  • Waking at night to open your bowels
  • Pale, greasy, foul-smelling stools that are hard to flush
  • New diarrhea after age 50, or with a family history of bowel cancer or celiac disease

Usually safe to manage at home

  • Occasional loose stools linked clearly to specific foods, alcohol or caffeine, with no red flags

What counts as chronic diarrhea

Doctors define diarrhea by stool consistency more than frequency: stools that are loose or watery (type 6 or 7 on the Bristol stool chart). It is acute if it lasts less than 2 weeks, persistent at 2 to 4 weeks, and chronic beyond 4 weeks. Chronic diarrhea affects roughly 1 in 20 adults at any time.

Chronic diarrhea is often grouped by stool type, which points to the cause:

TypeWhat it looks likeTypical causes
WateryThin, large-volumeIBS, microscopic colitis, bile acid diarrhea, lactose intolerance, medicines, hormone-secreting tumors (rare)
Fatty (steatorrhea)Pale, greasy, smelly, floats, hard to flushCeliac disease, pancreatic insufficiency, SIBO, giardia
InflammatoryBlood, mucus, pus, often with fever or painCrohn's disease, ulcerative colitis, infection, bowel cancer

Common causes of chronic diarrhea

Functional and dietary causes

  • Irritable bowel syndrome (IBS-D): diarrhea with belly pain that eases after a bowel movement, bloating and urgency, often triggered by stress or certain foods. There is no blood, weight loss or night-time diarrhea.
  • Lactose intolerance: bloating, gas and loose stools after dairy.
  • Fructose and sugar alcohols: sorbitol, mannitol and xylitol in sugar-free gum and sweets, and large amounts of fruit juice.
  • Caffeine and alcohol, especially regular heavy drinking.

Bowel diseases

  • Celiac disease: an immune reaction to gluten that damages the small intestine. It can cause diarrhea, bloating, weight loss, anemia and fatigue, or very subtle symptoms. Testing must be done while you are still eating gluten.
  • Inflammatory bowel disease: Crohn's disease and ulcerative colitis cause diarrhea, often with blood, urgency, pain and weight loss.
  • Microscopic colitis: watery, non-bloody diarrhea, mainly in people over 50 and more often women. The bowel looks normal on colonoscopy, so biopsies are needed. It is linked to NSAIDs, PPIs and SSRIs.
  • Bile acid diarrhea: bile acids reaching the colon cause watery diarrhea. It is common after gallbladder removal or ileal surgery and is often mistaken for IBS.
  • Small intestinal bacterial overgrowth (SIBO): bloating and loose stools, often after bowel surgery or with diabetes.
  • Colorectal cancer: a change in bowel habit, blood in the stool and anemia, especially after 50.

Medicines

Many medicines cause diarrhea: metformin, magnesium-containing antacids and supplements, antibiotics, some blood pressure medicines, PPIs, SSRIs, NSAIDs, colchicine and chemotherapy. Laxative overuse is an often overlooked cause.

Infections

Most infections are short-lived, but some persist: giardia (after drinking untreated water or travel), C. difficile after antibiotics, and parasites in travelers. People with HIV or weakened immunity can have chronic infections.

Other medical causes

  • Pancreatic insufficiency from chronic pancreatitis or cystic fibrosis, causing fatty stools
  • Overactive thyroid
  • Diabetes, through nerve damage to the gut, SIBO or metformin
  • Previous surgery, including gallbladder removal, bowel resection and weight-loss surgery
  • Rare hormone-secreting tumors (carcinoid, VIPoma)

How doctors investigate chronic diarrhea

Questions

Expect questions about stool appearance, frequency, night-time symptoms, blood, weight change, diet, alcohol, travel, recent antibiotics, medicines, surgery and family history of bowel disease or cancer. A stool diary for 1 to 2 weeks is helpful.

First-line tests

  • Blood tests: blood count (anemia), iron, B12, folate, kidney and liver function, thyroid, CRP and celiac antibodies (tTG-IgA)
  • Stool tests: infection (including giardia and C. difficile), fecal calprotectin (a marker of bowel inflammation that helps tell IBD from IBS), and sometimes fecal elastase for pancreatic function
  • Fecal immunochemical test (FIT) for hidden blood in some settings

Further tests

  • Colonoscopy with biopsies for red flags, raised calprotectin, or suspected microscopic colitis
  • Upper endoscopy with duodenal biopsy to confirm celiac disease
  • SeHCAT scan or blood tests for bile acid diarrhea where available
  • Breath tests for lactose intolerance or SIBO
  • CT or MRI of the abdomen in selected cases

Treatment

Treat the cause

  • Gluten-free diet for celiac disease
  • Anti-inflammatory and immune medicines for IBD and microscopic colitis
  • Bile acid binders for bile acid diarrhea
  • Pancreatic enzyme supplements for pancreatic insufficiency
  • Antibiotics for giardia, C. difficile or SIBO
  • Stopping or switching a culprit medicine

Managing symptoms

  • Low-FODMAP diet under a dietitian's guidance helps many people with IBS.
  • Soluble fiber such as psyllium can firm up stools.
  • Loperamide slows the bowel and reduces urgency. Follow the label dose. Do not use it with bloody diarrhea or fever unless a doctor advises it.
  • Fluids: drink enough to keep urine pale. Oral rehydration solutions replace salts when diarrhea is heavy.

Protecting your skin

Frequent loose stools irritate the skin around the anus. Clean gently with water, pat dry, and use a barrier cream.

Frequently asked questions

When is diarrhea considered chronic?

Diarrhea is considered chronic when loose or watery stools continue for 4 weeks or longer. Diarrhea lasting 2 to 4 weeks is called persistent. Any diarrhea lasting more than a few weeks should be discussed with a doctor, even if you feel otherwise well.

What is the most common cause of chronic diarrhea?

In developed countries, irritable bowel syndrome with diarrhea is the most common cause. Other frequent causes are food intolerances, medicines, bile acid diarrhea, celiac disease, microscopic colitis and inflammatory bowel disease. Tests are needed to tell them apart.

Can stress cause chronic diarrhea?

Stress does not cause bowel disease, but it strongly affects gut function and is a common trigger for IBS flares. Stress-related diarrhea should not include blood, weight loss or night-time symptoms. Those features suggest another cause and need investigation.

Is chronic diarrhea a sign of cancer?

Occasionally. Bowel cancer can change bowel habits, often with blood in the stool, anemia or weight loss, mainly in people over 50. Most chronic diarrhea is not cancer, but persistent changes, especially with red flags, should be checked with a FIT test or colonoscopy.

What should I eat if I have chronic diarrhea?

It depends on the cause. Limit caffeine, alcohol, sugar alcohols and very fatty meals. Try reducing dairy for 2 weeks to see if lactose is a trigger. Do not cut out gluten before celiac testing. A dietitian can guide a low-FODMAP trial if IBS is diagnosed.

Sources

This guide was written from current patient and clinical guidance, including:

  • American Gastroenterological Association: Clinical practice update on evaluation of chronic diarrhea
  • British Society of Gastroenterology: Guidelines for the investigation of chronic diarrhoea in adults
  • National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK): Diarrhea
  • American College of Gastroenterology: Clinical guideline on management of IBS
  • MedlinePlus: Diarrhea